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Behboudi, Afrouz, ProfessorORCID iD iconorcid.org/0000-0003-2525-3752
Publications (10 of 37) Show all publications
Peker, Y., Celik, Y., Behboudi, A., Redline, S., Lyu, J., Wei, Y., . . . Jelic, S. (2024). CPAP may promote an endothelial inflammatory milieu in sleep apnoea after coronary revascularization. EBioMedicine, 101(March 2024), Article ID 105015.
Open this publication in new window or tab >>CPAP may promote an endothelial inflammatory milieu in sleep apnoea after coronary revascularization
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2024 (English)In: EBioMedicine, E-ISSN 2352-3964, Vol. 101, no March 2024, article id 105015Article in journal (Refereed) Published
Abstract [en]

Background: Continuous positive airway pressure (CPAP) has failed to reduce cardiovascular risk in obstructive sleep apnoea (OSA) in randomized trials. CPAP increases angiopoietin-2, a lung distension-responsive endothelial proinflammatory marker associated with increased cardiovascular risk. We investigated whether CPAP has unanticipated proinflammatory effects in patients with OSA and cardiovascular disease.

Methods: Patients with OSA (apnoea-hypopnea index [AHI] ≥15 events/h without excessive sleepiness) in the Randomized Intervention with CPAP in Coronary Artery Disease and OSA study were randomized to CPAP or usual care following coronary revascularization. Changes in plasma levels of biomarkers of endothelial (angiopoietin-2, Tie-2, E-selectin, vascular endothelial growth factor [VEGF-A]) and lung epithelial (soluble receptor of advanced glycation end-products [sRAGE]) function from baseline to 12-month follow-up were compared across groups and associations with cardiovascular morbidity and mortality assessed.

Findings: Patients with OSA (n = 189; 84% men; age 66 ± 8 years, BMI 28 ± 3.5 kg/m2, AHI 41 ± 23 events/h) and 91 patients without OSA participated. Angiopoietin-2 remained elevated whereas VEGF-A declined significantly over 12 months in the CPAP group (n = 91). In contrast, angiopoietin-2 significantly declined whereas VEGF-A remained elevated in the usual care (n = 98) and OSA-free groups. The changes in angiopoietin-2 and VEGF-A were significantly different between CPAP and usual care, whereas Tie-2, sRAGE and E-selectin were similar. Greater 12-month levels of angiopoietin-2 were associated with greater mortality. Greater CPAP levels were associated with worse cardiovascular outcomes.

Interpretation: Greater CPAP levels increase proinflammatory, lung distension-responsive angiopoietin-2 and reduce cardioprotective angiogenic factor VEGF-A compared to usual care, which may counteract the expected cardiovascular benefits of treating OSA.

Place, publisher, year, edition, pages
Elsevier, 2024
Keywords
Continuous positive airway pressure, Sleep apnoea, Inflammation, Cardiovascular risk
National Category
Cardiology and Cardiovascular Disease
Research subject
Translational Medicine TRIM
Identifiers
urn:nbn:se:his:diva-25153 (URN)10.1016/j.ebiom.2024.105015 (DOI)38403558 (PubMedID)2-s2.0-85186750240 (Scopus ID)
Funder
NIH (National Institutes of Health)Swedish Research CouncilSwedish Heart Lung Foundation
Note

CC BY-NC-ND 4.0

Corresponding authors: E-mail addresses: sj366@cumc.columbia.edu (S. Jelic), djgottlieb@partners.org (D.J. Gottlieb).

Funding: National Institutes of Health/National Heart, Lung, and Blood Institute; Swedish Research Council; Swedish Heart-Lung Foundation; ResMed Foundation.

Available from: 2025-05-15 Created: 2025-05-15 Last updated: 2025-09-29Bibliographically approved
Peker, Y., Celik, Y., Behboudi, A., Redline, S., Gottlieb, D. J. & Jelic, S. (2024). Response to the Letter regarding the EBIOM-D-23-04056: “CPAP may promote an endothelial inflammatory milieu in sleep apnoea after coronary revascularization” [Letter to the editor]. EBioMedicine, 110, Article ID 105348.
Open this publication in new window or tab >>Response to the Letter regarding the EBIOM-D-23-04056: “CPAP may promote an endothelial inflammatory milieu in sleep apnoea after coronary revascularization”
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2024 (English)In: EBioMedicine, E-ISSN 2352-3964, Vol. 110, article id 105348Article in journal, Letter (Refereed) Published
Place, publisher, year, edition, pages
Elsevier, 2024
National Category
Cardiology and Cardiovascular Disease Surgery Radiology, Nuclear Medicine and Medical Imaging
Research subject
Translational Medicine TRIM
Identifiers
urn:nbn:se:his:diva-24736 (URN)10.1016/j.ebiom.2024.105348 (DOI)39487072 (PubMedID)2-s2.0-85209671731 (Scopus ID)
Funder
NIH (National Institutes of Health), R01HL106041NIH (National Institutes of Health), R01HL137234Swedish Research Council, 521-2011-537Swedish Research Council, 521-2013-3439Swedish Heart Lung Foundation, 20080592Swedish Heart Lung Foundation, 20090708Swedish Heart Lung Foundation, 20100664
Note

CC BY-NC-ND 4.0

Available online 31 October 2024, 105348

Correspondence Address: S. Jelic; Columbia University Vagelos College of Physicians and Surgeons, New York, United States; email: sj366@cumc.columbia.edu; D.J. Gottlieb; Medical Service, VA Boston Healthcare System, Boston, United States; email: djgottlieb@partners.org

Funding sources: National Institutes of Health/National Heart, Lung, and Blood Institute (NIH/NHLBI) R01HL106041 (S.J.) and R01HL137234 (S.J. and D.J.G.). Swedish Research Council (521-2011-537 and 521-2013-3439) (Y.P.); Swedish Heart-Lung Foundation (20080592, 20090708, and 20100664) (Y.P.); Resmed Foundation (Y.P.) and NHLBI HLR35315818 (SR). The authors are grateful to the Affinity Proteomics-Stockholm Unit at SciLifeLab Sweden for generating the Luminex data.

Available from: 2024-11-28 Created: 2024-11-28 Last updated: 2025-09-29Bibliographically approved
Peker, Y., Celik, Y., Yucel-Lindberg, T. & Behboudi, A. (2023). Association of TNF-α (-308 G/A) Gene Polymorphism With the Changes in Circulating TNF-α Levels Over 12 Months in Response to CPAP Treatment in the RICCADSA Cohort. Paper presented at American Thoracic Society 2023 International Conference, May 19-24, 2023 - Washington, DC. American Journal of Respiratory and Critical Care Medicine, 207, Article ID A2714.
Open this publication in new window or tab >>Association of TNF-α (-308 G/A) Gene Polymorphism With the Changes in Circulating TNF-α Levels Over 12 Months in Response to CPAP Treatment in the RICCADSA Cohort
2023 (English)In: American Journal of Respiratory and Critical Care Medicine, ISSN 1073-449X, E-ISSN 1535-4970, Vol. 207, article id A2714Article in journal, Meeting abstract (Other academic) Published
Place, publisher, year, edition, pages
American Thoracic Society, 2023
National Category
Respiratory Medicine and Allergy
Research subject
Translational Medicine TRIM
Identifiers
urn:nbn:se:his:diva-22572 (URN)10.1164/ajrccm-conference.2023.207.1_MeetingAbstracts.A2714 (DOI)000995814702367 ()
Conference
American Thoracic Society 2023 International Conference, May 19-24, 2023 - Washington, DC
Funder
Swedish Research CouncilSwedish Heart Lung Foundation
Note

A109. MICE TO HUMANS: MECHANISTIC DISCOVERIES IN SLEEP APNEA

This abstract is funded by: Swedish Research Council, Swedish Heart and Lung Foundation, Resmed Foundation, and resMed Inc

Available from: 2023-05-24 Created: 2023-05-24 Last updated: 2025-09-29Bibliographically approved
Celik, Y., Peker, Y., Yucel-Lindberg, T., Thelander, T. & Behboudi, A. (2023). Association of TNF-α (-308G/A) Gene Polymorphism with Changes in Circulating TNF-α Levels in Response to CPAP Treatment in Adults with Coronary Artery Disease and Obstructive Sleep Apnea. Journal of Clinical Medicine, 12(16), Article ID 5325.
Open this publication in new window or tab >>Association of TNF-α (-308G/A) Gene Polymorphism with Changes in Circulating TNF-α Levels in Response to CPAP Treatment in Adults with Coronary Artery Disease and Obstructive Sleep Apnea
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2023 (English)In: Journal of Clinical Medicine, E-ISSN 2077-0383, Vol. 12, no 16, article id 5325Article in journal (Refereed) Published
Abstract [en]

Rationale: We recently demonstrated that patients with coronary artery disease (CAD) and obstructive sleep apnea (OSA) carrying the tumor necrosis factor-alpha (TNF-α) A allele had increased circulating TNF-α levels compared with the ones carrying the TNF-α G allele. In the current study, we addressed the effect of TNF-α (-308G/A) gene polymorphism on circulating TNF-α levels following continuous positive airway pressure (CPAP) therapy. Methods: This study was a secondary analysis of the RICCADSA trial (NCT00519597) conducted in Sweden. CAD patients with OSA (apnea–hypopnea index) of ≥15 events/h and an Epworth Sleepiness Scale (ESS) score of <10 were randomized to CPAP or no-CPAP groups, and OSA patients with an ESS score of ≥10 were offered CPAP treatment. Blood samples were obtained at baseline and 12-month follow-up visits. TNF-α was measured by immunoassay (Luminex, R&D Systems). Genotyping of TNF-α-308G/A (single nucleotide polymorphism Rs1800629) was performed by polymerase chain reaction–restriction fragment length polymorphism. Results: In all, 239 participants (206 men and 33 women; mean age 64.9 (SD 7.7) years) with polymorphism data and circulating levels of TNF-α at baseline and 1-year follow-up visits were included. The median circulating TNF-α values fell in both groups between baseline and 12 months with no significant within- or between-group differences. In a multivariate linear regression model, a significant change in circulating TNF-α levels from baseline across the genotypes from GA to GA and GA to AA (standardized β-coefficient −0.129, 95% confidence interval (CI) −1.82; −0.12; p = 0.025) was observed in the entire cohort. The association was more pronounced among the individuals who were using the device for at least 4 h/night (n = 86; standardized β-coefficient −2.979 (95% CI −6.11; −1.21); p = 0.004)), whereas no significant association was found among the patients who were non-adherent or randomized to no-CPAP. The participants carrying the TNF-α A allele were less responsive to CPAP treatment regarding the decline in circulating TNF-α despite CPAP adherence (standardized β-coefficient −0.212, (95% CI −5.66; −1.01); p = 0.005). Conclusions: Our results suggest that TNF-α (-308G/A) gene polymorphism is associated with changes in circulating TNF-α levels in response to CPAP treatment in adults with CAD and OSA. 

Place, publisher, year, edition, pages
MDPI, 2023
Keywords
coronary artery disease, obstructive sleep apnea, tumor necrosis factor
National Category
Cardiology and Cardiovascular Disease Neurology Clinical Medicine
Research subject
Translational Medicine TRIM
Identifiers
urn:nbn:se:his:diva-23190 (URN)10.3390/jcm12165325 (DOI)001057693200001 ()37629366 (PubMedID)2-s2.0-85169096048 (Scopus ID)
Funder
Swedish Research Council, 521-2011-537, 521-2013-3439Swedish Heart Lung Foundation, 20080592, 20090708, 20100664Region Västra Götaland, ALFGBG-11538, ALFGBG-150801Lund University
Note

CC BY 4.0

© 2023 by the authors.

Correspondence: yuksel.peker@lungall.gu.se

This study was supported by grants from the Swedish Research Council (521-2011-537 and 521-2013-3439); the Swedish Heart–Lung Foundation (20080592, 20090708, and 20100664); the “Agreement concerning research and education of doctors” of Västra Götalandsregionen (ALFGBG-11538 and ALFGBG-150801); the research fund at Skaraborg Hospital (VGSKAS-4731, VGSKAS-5908,VGSKAS-9134, VGSKAS-14781, VGSKAS-40271, and VGSKAS-116431); Skaraborg Research and Development Council (VGFOUSKB-46371); Lund University; the Heart Foundation of Kärnsjukhuset; the ResMed Foundation; and ResMed Ltd. None of the funders had any direct influence on the design of the study, the analysis of the data, data collection, the drafting of the manuscript, or the decision to publish.

Available from: 2023-09-07 Created: 2023-09-07 Last updated: 2025-09-29Bibliographically approved
Celik, Y., Behboudi, A., Peker, Y., Redline, S. S., Jelic, S. & Gottlieb, D. J. (2023). Impact of Continuous Positive Airway Pressure on Serum Angiopoietin-2 Following Coronary Revascularization in Patients With Obstructive Sleep Apnea: The RICCADSA Study. Paper presented at American Thoracic Society 2023 International Conference, May 19-24, 2023 - Washington, DC. American Journal of Respiratory and Critical Care Medicine, 207, Article ID A6268.
Open this publication in new window or tab >>Impact of Continuous Positive Airway Pressure on Serum Angiopoietin-2 Following Coronary Revascularization in Patients With Obstructive Sleep Apnea: The RICCADSA Study
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2023 (English)In: American Journal of Respiratory and Critical Care Medicine, ISSN 1073-449X, E-ISSN 1535-4970, Vol. 207, article id A6268Article in journal, Meeting abstract (Other academic) Published
Place, publisher, year, edition, pages
American Thoracic Society, 2023
National Category
Respiratory Medicine and Allergy
Research subject
Translational Medicine TRIM
Identifiers
urn:nbn:se:his:diva-22573 (URN)10.1164/ajrccm-conference.2023.207.1_MeetingAbstracts.A6268 (DOI)000995814708014 ()
Conference
American Thoracic Society 2023 International Conference, May 19-24, 2023 - Washington, DC
Funder
Swedish Research CouncilSwedish Heart Lung FoundationNIH (National Institutes of Health), R01HL137234, R01 HL106041
Note

D20. MECHANISTIC INSIGHTS IN SLEEP DISORDERED BREATHING

The main RICCADSA trial was supported by the Swedish Research Council, the Swedish Heart and Lung Foundation, ResMed Foundation and ResMed Inc. The present study was supported by NIH grants R01HL137234 and R01 HL106041.

Available from: 2023-05-24 Created: 2023-05-24 Last updated: 2025-09-29Bibliographically approved
Behboudi, A., Thelander, T., Yazici, D., Celik, Y., Yucel-Lindberg, T., Thunström, E. & Peker, Y. (2021). Association of TNF-alpha (-308G/A) Gene Polymorphism with Circulating TNF-alpha Levels and Excessive Daytime Sleepiness in Adults with Coronary Artery Disease and Concomitant Obstructive Sleep Apnea. Journal of Clinical Medicine, 10(15), Article ID 3413.
Open this publication in new window or tab >>Association of TNF-alpha (-308G/A) Gene Polymorphism with Circulating TNF-alpha Levels and Excessive Daytime Sleepiness in Adults with Coronary Artery Disease and Concomitant Obstructive Sleep Apnea
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2021 (English)In: Journal of Clinical Medicine, E-ISSN 2077-0383, Vol. 10, no 15, article id 3413Article in journal (Refereed) Published
Abstract [en]

Obstructive sleep apnea (OSA) is common in patients with coronary artery disease (CAD), in which inflammatory activity has a crucial role. The manifestation of OSA varies significantly between individuals in clinical cohorts; not all adults with OSA demonstrate the same set of symptoms; i.e., excessive daytime sleepiness (EDS) and/or increased levels of inflammatory biomarkers. The further exploration of the molecular basis of these differences is therefore essential for a better understanding of the OSA phenotypes in cardiac patients. In this current secondary analysis of the Randomized Intervention with Continuous Positive Airway Pressure in CAD and OSA (RICCADSA) trial (Trial Registry: ClinicalTrials.gov; No: NCT 00519597), we aimed to address the association of tumor necrosis factor alpha (TNF-α)-308G/A gene polymorphism with circulating TNF-α levels and EDS among 326 participants. CAD patients with OSA (apnea–hypopnea-index (AHI) ≥ 15 events/h; n = 256) were categorized as having EDS (n = 100) or no-EDS (n = 156) based on the Epworth Sleepiness Scale score with a cut-off of 10. CAD patients with no-OSA (AHI < 5 events/h; n = 70) were included as a control group. The results demonstrated no significant differences regarding the distribution of the TNF-α alleles and genotypes between CAD patients with vs. without OSA. In a multivariate analysis, the oxygen desaturation index and TNF-α genotypes from GG to GA and GA to AA as well as the TNF-α-308A allele carriage were significantly associated with the circulating TNF-α levels. Moreover, the TNF-α-308A allele was associated with a decreased risk for EDS (odds ratio 0.64, 95% confidence interval 0.41–0.99; p = 0.043) independent of age, sex, obesity, OSA severity and the circulating TNF-α levels. We conclude that the TNF-α-308A allele appears to modulate circulatory TNF-α levels and mitigate EDS in adults with CAD and concomitant OSA.

Place, publisher, year, edition, pages
MDPI, 2021
Keywords
coronary artery disease, obstructive sleep apnea, tumor necrosis factor
National Category
Cardiology and Cardiovascular Disease Respiratory Medicine and Allergy Medical Genetics and Genomics
Research subject
Translational Medicine TRIM
Identifiers
urn:nbn:se:his:diva-20494 (URN)10.3390/jcm10153413 (DOI)000682078800001 ()34362196 (PubMedID)2-s2.0-85114081185 (Scopus ID)
Note

CC BY 4.0

Available from: 2021-08-20 Created: 2021-08-20 Last updated: 2025-09-29Bibliographically approved
Peker, Y., Thelander, T., Yazici, D., Celik, Y., Yucel-Lindberg, T., Thunström, E. & Behboudi, A. (2021). Association of TNF-α (-308G/A) Gene Polymorphism with Circulating TNF-α Levels and Excessive Daytime Sleepiness in Adults with Coronary Artery Disease and Concomitant Obstructive Sleep Apnea. Paper presented at American Thoracic Society 2021 International Conference, May 14-19, 2021. American Journal of Respiratory and Critical Care Medicine, 203(9 suppl S), Article ID A4713.
Open this publication in new window or tab >>Association of TNF-α (-308G/A) Gene Polymorphism with Circulating TNF-α Levels and Excessive Daytime Sleepiness in Adults with Coronary Artery Disease and Concomitant Obstructive Sleep Apnea
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2021 (English)In: American Journal of Respiratory and Critical Care Medicine, ISSN 1073-449X, E-ISSN 1535-4970, Vol. 203, no 9 suppl S, article id A4713Article in journal, Meeting abstract (Other academic) Published
Place, publisher, year, edition, pages
American Thoracic Society, 2021
National Category
Cardiology and Cardiovascular Disease
Research subject
Translational Medicine TRIM
Identifiers
urn:nbn:se:his:diva-22571 (URN)10.1164/ajrccm-conference.2021.203.1_MeetingAbstracts.A4713 (DOI)000685468904693 ()
Conference
American Thoracic Society 2021 International Conference, May 14-19, 2021
Funder
Swedish Research CouncilSwedish Heart Lung Foundation
Note

TP132. TP132 EPIDEMIOLOGY AND GENETICS OF SLEEP DISORDERS: EXAMINE THE LATEST ADVANCES!

This abstract is funded by: The Swedish Research Council, The Swedish Heart and Lung Foundation, The Resmed Foundation

Available from: 2023-05-24 Created: 2023-05-24 Last updated: 2025-09-29Bibliographically approved
Visuttijai, K., Pettersson, J., Mehrbani Azar, Y., van den Bout, I., Örndal, C., Marcickiewicz, J., . . . Behboudi, A. (2016). Lowered Expression of Tumor Suppressor Candidate MYO1C Stimulates Cell Proliferation, Suppresses Cell Adhesion and Activates AKT. PLOS ONE, 11(10), Article ID e0164063.
Open this publication in new window or tab >>Lowered Expression of Tumor Suppressor Candidate MYO1C Stimulates Cell Proliferation, Suppresses Cell Adhesion and Activates AKT
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2016 (English)In: PLOS ONE, E-ISSN 1932-6203, Vol. 11, no 10, article id e0164063Article in journal (Refereed) Published
Abstract [en]

Myosin-1C (MYO1C) is a tumor suppressor candidate located in a region of recurrent losses distal to TP53. Myo1c can tightly and specifically bind to PIP2, the substrate of Phosphoinositide 3-kinase (PI3K), and to Rictor, suggesting a role for MYO1C in the PI3K pathway. This study was designed to examine MYO1C expression status in a panel of well-stratified endometrial carcinomas as well as to assess the biological significance of MYO1C as a tumor suppressor in vitro. We found a significant correlation between the tumor stage and lowered expression of MYO1C in endometrial carcinoma samples. In cell transfection experiments, we found a negative correlation between MYO1C expression and cell proliferation, and MYO1C silencing resulted in diminished cell migration and adhesion. Cells expressing excess of MYO1C had low basal level of phosphorylated protein kinase B (PKB, a.k.a. AKT) and cells with knocked down MYO1C expression showed a quicker phosphorylated AKT (pAKT) response in reaction to serum stimulation. Taken together the present study gives further evidence for tumor suppressor activity of MYO1C and suggests MYO1C mediates its tumor suppressor function through inhibition of PI3K pathway and its involvement in loss of contact inhibition.

Place, publisher, year, edition, pages
Public Library of Science, 2016
Keywords
MYO1C, myosin-1c, tumor suppressor, AKT signaling
National Category
Other Medical Sciences
Research subject
Medical sciences; Bioinformatics
Identifiers
urn:nbn:se:his:diva-13020 (URN)10.1371/journal.pone.0164063 (DOI)000385698100017 ()27716847 (PubMedID)2-s2.0-84991449467 (Scopus ID)
Projects
Cellular, Molecular and Functional Characterization of the Tumor Suppressor Candidate MYO1C
Note

CC BY 4.0

Available from: 2016-10-11 Created: 2016-10-11 Last updated: 2025-09-29
Visuttijai, K., Ejeskär, K. & Behboudi, A. (2015). Analyses of protein expression of PI 3-kinase/AKT signaling in response to altered expression of motor protein MYO1C. Paper presented at 106th Annual Meeting of the American Association for Cancer Research (AACR), Philadelphia, PA, April 18-22, 2015. Cancer Research, 75(15 Supplement), Article ID 2166.
Open this publication in new window or tab >>Analyses of protein expression of PI 3-kinase/AKT signaling in response to altered expression of motor protein MYO1C
2015 (English)In: Cancer Research, ISSN 0008-5472, E-ISSN 1538-7445, Vol. 75, no 15 Supplement, article id 2166Article in journal, Meeting abstract (Refereed) Published
Abstract [en]

In the previous work, a minimal region of recurrent deletion distal to the Tp53 gene was identified in BDII rat model for endometrial adenocarcinoma and the MYO1C gene was singled out as the tumor suppressor candidate in this region. Myo1c can bind to PIP2, the substrate of PI3-kinase, as well as to the mTOR complex, indicating a role for MYO1C in the PI3-kinase pathway. In this study, we assessed protein levels of 12 members of PI3-kinase/AKT signaling pathways in transient transfected HeLa cells expressing increasing amounts of MYO1C using Western blotting and densitometry analyses. Results revealed decreased protein levels of PTEN, AKT, and phosphorylated AKT, at both residues T308 and S473, and an increased expression of p110α protein in the cells transfected with the MYO1C gene expression constructs compared to the control cells transfected with empty plasmid. We next investigated potential effect of MYO1C protein depletion on serum-induced activation (phosphorylation) of AKT in the MCF10A cells that has de novo expression of MYO1C protein. Following serum stimulation, AKT was rapidly phosphorylated in its residue S473 (pAKTS473) in the cells transfected with MYO1C-siRNA, but with significantly lesser extent in the control cells. Overall, a negative correlation between the protein expression of MYO1C and AKT expression/activation was suggested, signifying a role for MYO1C as a negative regulator of PI3-kinsase/AKT signaling pathway. This is in agreement with the initial hypothesis of involvement of MYO1C in tumorigenesis pathways through its potential tumor suppressor activity. Further studies are required to fully understand the functional contribution of MYO1C to tumor development.

Place, publisher, year, edition, pages
American Association for Cancer Research, 2015
National Category
Genetics and Genomics Cancer and Oncology
Identifiers
urn:nbn:se:his:diva-22682 (URN)10.1158/1538-7445.am2015-2166 (DOI)000371578504271 ()
Conference
106th Annual Meeting of the American Association for Cancer Research (AACR), Philadelphia, PA, April 18-22, 2015
Available from: 2023-06-12 Created: 2023-06-12 Last updated: 2025-09-29Bibliographically approved
Hedberg Oldfors, C., Garcia Dios, D., Linder, A., Visuttijai, K., Samuelson, E., Karlsson, S., . . . Behboudi, A. (2015). Analysis of an independent tumor suppressor locus telomeric to Tp53 suggested Inpp5k and Myo1c as novel tumor suppressor gene candidates in this region. BMC Genetics, 16(1), Article ID 80.
Open this publication in new window or tab >>Analysis of an independent tumor suppressor locus telomeric to Tp53 suggested Inpp5k and Myo1c as novel tumor suppressor gene candidates in this region
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2015 (English)In: BMC Genetics, E-ISSN 1471-2156, Vol. 16, no 1, article id 80Article in journal (Refereed) Published
Abstract [en]

Several reports indicate a commonly deleted chromosomal region independent from, and distal to the TP53 locus in a variety of human tumors. In a previous study, we reported a similar finding in a rat tumor model for endometrial carcinoma (EC) and through developing a deletion map, narrowed the candidate region to 700 kb, harboring 19 genes. In the present work real-time qPCR analysis, Western blot, semi-quantitative qPCR, sequencing, promoter methylation analysis, and epigenetic gene expression restoration analyses (5-aza-2'-deoxycytidine and/or trichostatin A treatments) were used to analyze the 19 genes located within the candidate region in a panel of experimental tumors compared to control samples.

RESULTS:

Real-time qPCR analysis suggested Hic1 (hypermethylated in cancer 1), Inpp5k (inositol polyphosphate-5-phosphatase K; a.k.a. Skip, skeletal muscle and kidney enriched inositol phosphatase) and Myo1c (myosin 1c) as the best targets for the observed deletions. No mutation in coding sequences of these genes was detected, hence the observed low expression levels suggest a haploinsufficient mode of function for these potential tumor suppressor genes. Both Inpp5k and Myo1c were down regulated at mRNA and/or protein levels, which could be rescued in gene expression restoration assays. This could not be shown for Hic1.

CONCLUSION:

Innp5k and Myo1c were identified as the best targets for the deletions in the region. INPP5K and MYO1C are located adjacent to each other within the reported independent region of tumor suppressor activity located at chromosome arm 17p distal to TP53 in human tumors. There is no earlier report on the potential tumor suppressor activity of INPP5K and MYO1C, however, overlapping roles in phosphoinositide (PI) 3-kinase/Akt signaling, known to be vital for the cell growth and survival, are reported for both. Moreover, there are reports on tumor suppressor activity of other members of the gene families that INPP5K and MYO1C belong to. Functional significance of these two candidate tumor suppressor genes in cancerogenesis pathways remains to be investigated.

Place, publisher, year, edition, pages
Biomed Central, 2015
Keywords
cancer, Myosin-1c, Inpp5k, tumor suppressor
National Category
Basic Medicine
Research subject
Medical sciences
Identifiers
urn:nbn:se:his:diva-12031 (URN)10.1186/s12863-015-0238-4 (DOI)000357852600001 ()26170120 (PubMedID)2-s2.0-84937029410 (Scopus ID)
Funder
Knowledge Foundation, 20120311Åke Wiberg Foundation, 946217602
Available from: 2016-03-14 Created: 2016-03-14 Last updated: 2025-09-29Bibliographically approved
Organisations
Identifiers
ORCID iD: ORCID iD iconorcid.org/0000-0003-2525-3752

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