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  • 1.
    Håkansson, Nina
    et al.
    University of Skövde, The Systems Biology Research Centre. University of Skövde, School of Life Sciences.
    Jonsson, Annie
    University of Skövde, The Systems Biology Research Centre. University of Skövde, School of Life Sciences.
    Lennartsson, Jenny
    University of Skövde, The Systems Biology Research Centre. University of Skövde, School of Life Sciences.
    Lindström, T.
    Linköping University.
    Wennergren, U.
    Linköping University.
    Generating Structure Specific Networks2010In: Advances in Complex Systems, ISSN 0219-5259, Vol. 13, no 2, p. 239-250Article in journal (Refereed)
    Abstract [en]

    Theoretical exploration of network structure significance requires a range of different networks for comparison. Here, we present a new method to construct networks in a spatial setting that uses spectral methods in combination with a probability distribu-tion function. Nearly all previous algorithms for network construction have assumed randomized distribution of links or a distribution dependent on the degree of the nodes.We relax those assumptions. Our algorithm is capable of creating spectral networks along a gradient from random to highly clustered or diverse networks. Number of nodes and link density are specified from start and the structure is tuned by three parameters (γ, σ, κ). The structure is measured by fragmentation, degree assortativity, clusteringand group betweenness of the networks. The parameter γ regulates the aggregation in the spatial node pattern and σ and κ regulates the probability of link forming.

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