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Data in support of the comparative genome analysis of Lysinibacillus B1-CDA, a bacterium that accumulates arsenics
University of Skövde, School of Bioscience. University of Skövde, The Systems Biology Research Centre. Örebro University. (Biotechnology)ORCID iD: 0000-0002-8162-8945
University of Skövde, School of Bioscience. University of Skövde, The Systems Biology Research Centre. (Biotechnology)
Dr. D. Y. Patil Biotechnology and Bioinformatics Institute, India.
Örebro University.
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2015 (English)In: Data in Brief, ISSN 2352-3409, Vol. 5, 579-585 p.Article in journal (Refereed) Published
Abstract [en]

This study is a part of our long term project on bioremediation of toxic metals and other pollutants for protection of human health and the environment from severe contamination. The information and results presented in this data article are based on both in vitro and in silico experiments. In vitro experiments were used to investigate the presence of arsenic responsive genes in a bacterial strain B1-CDA that is highly resistant to arsenics. However, in silico studies were used to annotate the function of the metal responsive genes. By using this combined study consisting of in vitro and in silico experiments we have identified and characterized specific genes from B1-CDA that can be used as a potential tool for removal of arsenics as well as other heavy metals from the contaminated environment.

Place, publisher, year, edition, pages
Elsevier, 2015. Vol. 5, 579-585 p.
Keyword [en]
Bacteria, Arsenic, Bioremediation, Genome, De novo assembly, gene prediction
National Category
Bioinformatics and Systems Biology Biochemistry and Molecular Biology
Research subject
Natural sciences
Identifiers
URN: urn:nbn:se:his:diva-11576DOI: 10.1016/j.dib.2015.09.040PubMedID: 26387925Scopus ID: 2-s2.0-84945246394OAI: oai:DiVA.org:his-11576DiVA: diva2:858343
Available from: 2015-10-02 Created: 2015-10-01 Last updated: 2016-01-25Bibliographically approved

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