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Biologically plausible visual representation of modular decomposition
University of Skövde, School of Humanities and Informatics.
2005 (English)Independent thesis Basic level (degree of Bachelor)Student thesis
Abstract [en]

Modular decompositions of protein interaction networks can be used to identify modules of cooperating proteins. The biological plausibility off these modules might be questioned though. This report describes how a modular decomposition can be completed with semantic information in the visual representation. Possible methods for creating modules of functionally related proteins are also proposed in this work. The results show that such modules, with advantage can be combined with modules from a graph decomposition, to find proteins that are likely to cooperate to perform certain functions in organisms

Place, publisher, year, edition, pages
Skövde: Institutionen för kommunikation och information , 2005. , 37 p.
Keyword [en]
Modular decomposition, Yeast two-hybrid, Gene Ontology
National Category
Computer Science
Identifiers
URN: urn:nbn:se:his:diva-953OAI: oai:DiVA.org:his-953DiVA: diva2:3377
Presentation
(English)
Uppsok
Technology
Supervisors
Available from: 2008-03-07 Created: 2008-03-07 Last updated: 2009-12-11

Open Access in DiVA

fulltext(985 kB)160 downloads
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File name FULLTEXT01.psFile size 985 kBChecksum MD5
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Type fulltextMimetype application/postscript
fulltext(341 kB)128 downloads
File information
File name FULLTEXT02.pdfFile size 341 kBChecksum SHA-512
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Type fulltextMimetype application/pdf

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CiteExportLink to record
Permanent link

Direct link
Cite
Citation style
  • apa
  • harvard1
  • ieee
  • modern-language-association-8th-edition
  • vancouver
  • Other style
More styles
Language
  • de-DE
  • en-GB
  • en-US
  • fi-FI
  • nn-NO
  • nn-NB
  • sv-SE
  • Other locale
More languages
Output format
  • html
  • text
  • asciidoc
  • rtf