his.sePublications
Change search
CiteExportLink to record
Permanent link

Direct link
Cite
Citation style
  • apa
  • harvard1
  • ieee
  • modern-language-association-8th-edition
  • vancouver
  • Other style
More styles
Language
  • de-DE
  • en-GB
  • en-US
  • fi-FI
  • nn-NO
  • nn-NB
  • sv-SE
  • Other locale
More languages
Output format
  • html
  • text
  • asciidoc
  • rtf
Towards an Automated Analysis of Biomedical Abstracts
University of Skövde, School of Humanities and Informatics.
University of Skövde, School of Humanities and Informatics.
University of Skövde, School of Humanities and Informatics.
2006 (English)In: Data Integration in the Life Sciences: Third International Workshop, DILS 2006, Springer, 2006, 50-65 p.Conference paper, (Other academic)
Abstract [en]

An essential part of bioinformatic research concerns the iterative process of validating hypotheses by analyzing facts stored in databases and in published literature. This process can be enhanced by language technology methods, in particular by automatic text understanding. Since it is becoming increasingly difficult to keep up with the vast number of scientific articles being published, there is a need for more easily accessible representations of the current knowledge. The goal of the research described in this paper is to develop a system aimed to support the large-scale research on metabolic and regulatory pathways by extracting relations between biological objects from descriptions found in literature. We present and evaluate the procedures for semantico-syntactic tagging, dividing the text into parts concerning previous research and current research, syntactic parsing, and transformation of syntactic trees into logical representations similar to the pathway graphs utilized in the Kyoto Encyclopaedia of Genes and Genomes.

Place, publisher, year, edition, pages
Springer, 2006. 50-65 p.
Series
Lecture Notes in Computer Science, ISSN 0302-9743 ; 4075
National Category
Engineering and Technology
Research subject
Technology
Identifiers
URN: urn:nbn:se:his:diva-1917DOI: 10.1007/11799511_6ISI: 000239622300004Scopus ID: 2-s2.0-33746718080ISBN: 978-3-540-36593-8 OAI: oai:DiVA.org:his-1917DiVA: diva2:32193
Available from: 2007-09-21 Created: 2007-09-21 Last updated: 2012-12-11Bibliographically approved

Open Access in DiVA

No full text

Other links

Publisher's full textScopus

Search in DiVA

By author/editor
Gawronska, BarbaraOlsson, BjörnErlendsson, Björn
By organisation
School of Humanities and Informatics
Engineering and Technology

Search outside of DiVA

GoogleGoogle Scholar

Altmetric score

Total: 661 hits
CiteExportLink to record
Permanent link

Direct link
Cite
Citation style
  • apa
  • harvard1
  • ieee
  • modern-language-association-8th-edition
  • vancouver
  • Other style
More styles
Language
  • de-DE
  • en-GB
  • en-US
  • fi-FI
  • nn-NO
  • nn-NB
  • sv-SE
  • Other locale
More languages
Output format
  • html
  • text
  • asciidoc
  • rtf